Cluster description
Hardware
Compute nodes
| Node | Entity | Type | CPUs | Memory | GPUs |
|---|---|---|---|---|---|
| cpu-node[32-39] | RPBS | Supermicro X8DTT-H | 12 (2x Intel Xeon CPU X5650 @ 2.67GHz) | 48GB | |
| cpu-node[69-72] | Epigenomique | Dell PowerEdge FC630 | 32 (2x Intel Xeon CPU E5-2630 v3 @ 2.40GHz | 64GB | |
| cpu-node79 | RPBS | Dell PowerEdge FC630 | 56 (2x Intel Xeon CPU E5-2660 v4 @ 2.00GHz) | 56GB | |
| cpu-node80 | RPBS | Dell PowerEdge FC640 | 96 (2x Intel Xeon Gold 5220R @ 2.20GHz) | 192GB | |
| cpu-node[81-84] | RPBS | Dell PowerEdge FC640 | 64 (2x Intel Xeon Gold 5218 @ 2.30GHz) | 256GB | |
| cpu-node110 | RPBS | Dell PowerEdge R920 | 120 (4x Intel Xeon E7-4870 v2 @ 2.30GHz) | 512GB | |
| cpu-node[130-145] | iPOP-UP | Dell PowerEdge C6525 | 128 (2x AMD EPYC 7452 @ 2.35GHz) | 256GB | |
| gpu-node2 | CMPLI | Asus Z10PE-D8 WS | 16 (2x Intel Xeon E5-2623 v3 @ 3.00GHz) | 16GB | 2x GeForce GTX1070 |
| gpu-node4 | CMPLI | Asus Z10PE-D8 WS | 40 (2x Intel Xeon E5-2630 v4 @ 2.20GHz) | 32GB | 2x Geforce GTX1080Ti |
| gpu-node[5-6] | RPBS | Asus Z10PE-D8 WS | 40 (2x Intel Xeon E5-2630 v4 @ 2.20GHz) | 32GB | 2x GeForce RTX2080Ti |
| gpu-node[7-8] | CMPLI | Asus Z10PE-D8 WS | 40 (2x Intel Xeon E5-2630 v4 @ 2.20GHz) | 32GB | 2x GeForce RTX2080Ti |
| gpu-node9 | CMPLI | Dell PowerEdge R7525 | 64 (2x AMD EPYC 7282 @ 2.80GHz) | 128GB | 3x Quadro RTX6000 |
| gpu-node10 | Master BI | Dell PowerEdge R7525 | 32 (2x AMD EPYC 7262 @ 3.20GHz) | 64GB | 3x Quadro RTX6000 |
| gpu-node11 | RPBS | Dell PowerEdge T640 | 32 (2x Intel Xeon Silver 4208 @ 2.10GHz) | 96GB | 1x GeForce RTX3090 |
| gpu-node13 | RPBS | Dell PowerEdge T640 | 32 (2x Intel Xeon Silver 4208 @ 2.10GHz) | 96GB | 2x GeForce RTX3080Ti |
| gpu-node14 | CMPLI | Dell Precision 7920 | 64 (2x Intel Xeon Gold 6226R @ 2.90GHz) | 192GB | 3x Quadro RTXA6000 |
| gpu-node15 | iPOP-UP | ProLiant DL385 Gen10 Plus v2 | 32 (2x AMD EPYC 7313 @ 3.0GHz) | 512GB | 2x Tesla A100 80GB |
| gpu-node16 | CMPLI | ProLiant DL385 Gen10 Plus v2 | 32 (2x AMD EPYC 7313 @ 3.0GHz) | 512GB | 2x Tesla A100 80GB |
| gpu-node17 | iPOP-UP | ProLiant DL385 Gen10 Plus v2 | 32 (2x AMD EPYC 7313 @ 3.0GHz) | 512GB | 2x Tesla A100 80GB |
| gpu-node18 | iPOP-UP | ProLiant DL385 Gen10 Plus v2 | 32 (2x AMD EPYC 7313 @ 3.0GHz) | 512GB | 2x Tesla A100 80GB |
Infrastructure
| Node | Entity | Type | Role |
|---|---|---|---|
| master1 | iPOP-UP | Dell PowerEdge R440 | Slurm controler, Slurm database, gateway |
| virtserv5 | RPBS | Dell PowerEdge R440 | Virtualization |
| virtserv6 | iPOP-UP | HP ProLiant DL380 Gen10 | Virtualization |
| directory | CMPLI | HP ProLiant DL160 Gen10 | LDAP server, DHCP, DNS |
Storage
| Node | Entity | Type | Storage | Role |
|---|---|---|---|---|
| hot-storage-mds1 | iPOP-UP | Dell PowerEdge R740xd | 8x 1.92TB SSDs | Metadata / management server (Lustre) |
| hot-storage-oss[1-2] | iPOP-UP | DELL PowerEdge R740xd | 20x 3.84TB SSDs | Object Storage server (Lustre) |
| cold-storage1 | CMPLI | DELL PowerEdge R740xd | 12x 12TB HDD | NFS server |
| cold-storage1 (extension) | iPOP-UP | Dell PowerVault MD1400 | 12x 12TB HDD | NFS server (extension) |
Network
| Node | Entity | Type | Role | Description |
|---|---|---|---|---|
| cmpli-rtr1 | iPOP-UP | Juniper SRX1500 | Routing, filtering | 16x 1GbE + 4x 10GbE ports |
| cmpli-rtr2 | CMPLI | Juniper SRX1500 | Routing, filtering | 16x 1GbE + 4x 10GbE ports |
| sw-data-mgmt-[1-2] | RPBS | Juniper EX3300 | Management, data | 24x 1000BASE-T 1GbE ports |
| sw-dell-10g-[1,3] | RPBS | Dell N4032F | Data | 24x SFP+ 10GbE ports |
| sw-dell-10g-2 | RPBS | Dell S4128F-ON | Data | 28x SFP+ 10GbE ports |
| sw-dell-100g | RPBS | Dell S5232F-ON | Data | 32x QSFP28 100GbE |
Software layer
The cluster is managed by Slurm (version 20.11.8).
Scientific software and tools are available through Environment Modules and are mainly based on Conda packages or Singularity images.
Operating System: CentOS 7
Around the cluster management: Proxmox VE
Deployment and configuration are powered by Saltstack, Terraform and Gitlab.